Results
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| Property | Organism | Value | Units | ID | Details |
|---|---|---|---|---|---|
| Canonical nucleosome length | Eukaryotes | 147 | bp | 102979 | Field Y. et al., Distinct... |
| Length of nucleosome linker | Eukaryotes | 10 | bp | 102987 | Widom J. Structure, dynamics... |
| Preferred nucleosome linker lengths | Budding yeast Saccharomyces cerevisiae | 10.41n+4.6 or 10.47n+5.5 | bp | 107880 | Brogaard K, Xi L, Wang JP... |
| Rate of spontaneous nucleosome unwrapping | Eukaryotes | 4 | sec^-1 | 103088 | Li G, Levitus M, Bustamante C... |
| Rate of nucleosome rewrapping | Eukaryotes | 20-90 | rewrappings/sec | 103089 | Li G, Levitus M, Bustamante C... |
| Fully wrapped lifetime of nucleosome | Eukaryotes | 0.25 | sec | 103090 | Li G, Levitus M, Bustamante C... |
| Length of DNA section where nucleosome occurs | Eukaryotes | 157-240 | bp | 103084 | Davey CA, Sargent DF... |
| Preferred nucleosome linker lengths for human cells | Human Homo sapiens | ~10хn+7.5 | nucleotides | 107879 | Kato M et al., Dinucleosome... |
| Fraction of genome compacted into nucleosome arrays | Eukaryotes | 75-90 | % | 102977 | Field Y, Kaplan N, F... |
| Length of periodic dinucleotide sequences preferred by nucleosome | Eukaryotes | 10 | bp | 102978 | Field Y, Kaplan N, F... |
| Number of histones in nucleosome core particle | Eukaryotes | 8 | histones | 102985 | Widom J. Structure, dynamics... |
| Shell volume of nucleosome | Various | 3.28e+5 | Å^3 | 103048 | Neil R. Voss. 2006 'Geometric... |
| Nucleosome repeat length typical of sea urchin sperm | Black Sea Urchin Arbacia lixula | 237 | bp | 111128 | Robinson PJ, Fairall L... |
| Number of atoms in nucleosome | Various | 12341 | Atoms | 103047 | Neil R. Voss. 2006 'Geometric... |
| Energy of DNA in curved loop of nucleosome | Generic | 21 | kcal/mol | 103140 | Garcia HG, Grayson P... |
| Number of nucleotides per superhelical turn of DNA in nucleosome | Eukaryotes | 80 | bp | 103138 | Garcia HG, Grayson P... |
| Equilibrium constant for unwrapping of DNA near end of nucleosome | Generic | 0.01-0.1 | kcal/mol | 103144 | Garcia HG, Grayson P... |
| Equilibrium constant for unwrapping of DNA near middle of nucleosome | Generic | 0.00001-0.0001 | kcal/mol | 103145 | Garcia HG, Grayson P... |
| Radius of curvature at centerline of DNA in nucleosome | Generic | 4.5 | nm | 103139 | Garcia HG, Grayson P... |
| Distance between dinucleotide motifs conferring DNA high affinity binding to nucleosome | Generic | 10 | bp | 103151 | Garcia HG, Grayson P... |