Results
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Property | Organism | Value | Units | ID | Details |
---|---|---|---|---|---|
Accuracy of DNA synthesis and apparent accuracy of DNA methylation | Various | DNA synthesis 1 ‘unforced’ error for every 10^7–10^8 bases copied: DNA methylation ~96% | N/A | 112981 | Bird A. Perceptions of... |
Number of genes that are expressed differently in men and women | Human Homo sapiens | >6,500 | genes | 113472 | Gershoni M, Pietrokovski... |
Selection analysis summary of sex-specific and moderately sex-specific genes | Human Homo sapiens | Table - link | N/A | 113473 | Gershoni M, Pietrokovski... |
Histone post-translational modification and variant-specific turnover in HeLa cells | Human Homo sapiens | Table - link | N/A | 106360 | Zee BM, Levin RS, Dimaggio PA... |
Fraction of all genes that are regulated by at least one miRNA | Unspecified | ~20-30 | % | 113092 | Malan-Müller S, Hemmings... |
Fraction of cytosines in DNA that are globally methylated | Thale cress Arabidopsis thaliana | ~10.5 | % of all cytosines | 113094 | Vidalis A, Živković D... |
Fraction of diversity in GMLs (Genome-wide Methylation Levels-a measure of the percentage of all cytosines that are methylated) that is accounted for by variation in genome size | Plants | ~14 | % of diversity in GMLs | 113096 | Vidalis A, Živković D... |
Heuristic definition of Body methylated (BM) genes | Eukaryotes | genes that methylate >90% of their CG sites and <5% of their CHG and CHH sites | unitless | 113097 | Vidalis A, Živković D... |
Rates of forward epimutations (i.e., stochastic gains of methylation) & backward epimutations (i.e., stochastic loss of methylation) in MA [mutation accumulation]-lines | Thale cress Arabidopsis thaliana | forward epimutations ~2.56×10^−4: backward epimutations ~6.3×10^−4 | epimutation/CG site/haploid genome/generation | 113098 | Vidalis A, Živković D... |
Rates of forward epimutations (i.e., stochastic gains of methylation) & backward epimutations (i.e., stochastic loss of methylation) in genes & transposable elements (TE) | Thale cress Arabidopsis thaliana | genes forward 3.48×10^−4 backward 1.47×10^−3: TE forward 3.24×10^−4 backwards 1.2×10^−5 | epimutation/CG site/haploid genome/generation | 113100 | Vidalis A, Živković D... |
Rate of nucleosome rewrapping | Eukaryotes | 20-90 | rewrappings/sec | 103089 | Li G, Levitus M, Bustamante C... |
Ratio of proteins that are serine/threonine/tyrosine phosphorylated | Various | Bacillus subtilis Ser/Thr/Tyr 70:20:10 Human HeLa cell culture Ser/Thr/Tyr 86:12:2 | N/A | 111946 | Macek B. The serine/... |
Fraction of proteins that are phosphorylated | Human Homo sapiens | >30 | % | 111947 | Macek B. The serine/... |
Fraction of autosomal genes involved with sexually dimorphic patterns of gene expression | Human Homo sapiens | ≤60 | % | 113475 | Gershoni M, Pietrokovski... |
Range of Genome-wide Methylation Levels (GMLs-a measure of the percentage of all cytosines that are methylated) | Plants | Theobroma cacao 5%-Beta vulgaris 43%: mean ~16% | % | 113095 | Vidalis A, Živković D... |
Number of post-translational modification (PTM) types that have been identified as of 2012 | Generic | >200 | PTM | 109315 | Prabakaran S, Lippens G... |
Length of DNA loops making chromosome territories (CT) | Eukaryotes | 50 to 200 | kbp | 106156 | Cremer T, Cremer M, Dietzel S... |
Fully wrapped lifetime of nucleosome | Eukaryotes | 0.25 | sec | 103090 | Li G, Levitus M, Bustamante C... |
Rate of spontaneous nucleosome unwrapping | Eukaryotes | 4 | sec^-1 | 103088 | Li G, Levitus M, Bustamante C... |
Mass change on acetylation | Generic | 42 | Da | 106058 | Christopher Walsh. 2006... |