| Value |
22
%
|
| Organism |
Archaea Halobacterium sp. NRC-1 |
| Reference |
Ramisetty BCM, Sudhakari PA. Bacterial 'Grounded' Prophages: Hotspots for Genetic Renovation and Innovation. Front Genet. 2019 Feb 12 10: 65. doi: 10.3389/fgene.2019.00065 p.4 left column top paragraphPubMed ID30809245
|
| Primary Source |
Bonneau, R., Baliga, N. S., Deutsch, E. W., Shannon, P., and Hood, L. (2004). Comprehensive de novo structure prediction in a systems-biology context for the archaea Halobacterium sp. NRC-1. Genome Biol. 5:R52. doi: 10.1186/gb-2004-5-8-r52PubMed ID15287974
|
| Method |
Primary source abstract: "Simultaneous analysis of the association network, coordinated mRNA level changes in microarray experiments and genome-wide structure prediction has allowed [investigators] to glean significant biological insights into the roles of several Halobacterium NRC-1 proteins of previously unknown function, and significantly reduce the number of proteins encoded in the genome of this haloarchaeon for which no annotation is available." |
| Comments |
P.4 left column top paragraph: "A large number of IS (insertion sequences) elements that are collectively referred to as minichromosomes comprise highly divergent prophage remnants constituting 22% of Halobacterium sp. NRC-1 genome, and code for transposases associated with phage genomes and other mobile genetic elements (primary source)." |
| Entered by |
Uri M |
| ID |
116993 |