Results
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Property | Organism | Value | Units | ID | Details |
---|---|---|---|---|---|
Ribosome density | Bacteria Escherichia coli | 3.46 | ribosomes/100 codons | 109522 | Siwiak M, Zielenkiewicz... |
Ribosome content | Bacteria Escherichia coli | 62% RNA: 38% protein | % | 109047 | Ridgway D et al., Co... |
Ribosome density | Bacteria Escherichia coli | 6.6 | Ribosomes/kb coding sequence | 107727 | Piques et al., Ribosome... |
Total ribosome number and cytoplasmic ribosome density (average±standard deviation) | Bacteria Escherichia coli | Ribosomes/cell 26,100±4,020: cytoplasmic ribosome density 2,840±120 ribosomes/0.1fL cytoplasm | N/A | 117348 | Hiroyuki Yamada et al.... |
Rate of elongation reaction: Ribosome + RNAn > Ribosome·RNAn+1 | Bacteria Escherichia coli | 100 | bp/sec | 100197 | A Arkin, J Ross, HH McAdams... |
Average ribosome number density | Bacteria Escherichia coli | 27000 (25,000 to 31,000) | Ribosomes/μm^3 | 108603 | Bakshi S, Siryaporn A... |
Diameter of 70S (intact) ribosome | Bacteria Escherichia coli | 26 | nm | 100121 | Zhu J, Penczek PA, Schröder R... |
Size of 70s (intact) of ribosome | Bacteria Escherichia coli | 21 | nm | 102320 | Kaczanowska M, Rydén-Aulin... |
RNA nucleotides in (intact) ribosome | Bacteria Escherichia coli | 4566 (Table - link) | nucleotides | 101439 | Bremer, H., Dennis, P.... |
Mass fraction of ribosome and the number of ribosomes in E. coli TG1 at different phases of growth | Bacteria Escherichia coli | Table - link | N/A | 105780 | Nilsson M, Bülow L, Wahlund... |
Molecular mass of (intact) ribosome | Bacteria Escherichia coli | 2700 | kDalton | 100118 | Yamamoto T, Izumi S,... |
Peak number density within ribosome-rich regions | Bacteria Escherichia coli | 65000 (56,000 to 73,000) | Ribosomes/μm^3 | 108604 | Bakshi S, Siryaporn A... |
Persistence length of mRNA-ribosome complexes | Bacteria Escherichia coli | 0.79 | nm | 109074 | Brandt F, Etchells SA... |
Molecular mass of 50S subunit of ribosome | Bacteria Escherichia coli | 1.34e+6 (9.31e+5 RNA: 4.09e+5 Protein Table - link) | Da | 102509 | Neil R. Voss. 2006 'Geometric... |
Number of amino acid residues in 70S ribosome | Bacteria Escherichia coli | 7536 (Table - link) | aa/rib | 110218 | Calculated by Prof. Stefan... |
Number of protein types to make ribosome | Bacteria Escherichia coli | 56 (Table - link) | Unitless | 100111 | Arnold RJ, Reilly JP.... |
Backbone elasticity of mRNA-ribosome complexes | Bacteria Escherichia coli | 900 (±140) | pN | 109075 | Vanzi F, Takagi Y, Shuman H... |
Molecular mass of RNA component of ribosome | Bacteria Escherichia coli | 1700 | kDalton | 100119 | http://redpoll.pharm... |
Total number of nucleotides in the ribosome rRNAs | Bacteria Escherichia coli | 4567 | nucleotides | 101176 | http://biocyc.org/EC... |
Number of Initiation Factor IF2 molecules per ribosome | Bacteria Escherichia coli | 0.3 (Table - link) | molecules/ribosome | 104063 | Bremer, H., Dennis, P.... |