Results
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Property | Organism | Value | Units | ID | Details |
---|---|---|---|---|---|
Genome of an endosymbiont bacteria | Carsonella ruddii | 159662 | bp | 100622 | Atsushi Nakabachi et al.... |
Transcription error rate of endosymbiotic bacteria (corrected value) | Carsonella ruddii | 5.09E-05 | per nucleotide | 113574 | Traverse CC, Ochman H.... |
Genome size (smallest of endosymbiont bacteria) | Bacteria Hodgkinia cicadicola | 143795 | bps | 108693 | McCutcheon JP, McDonald BR... |
Fraction of transcription errors that cause an amino acid substitution | bacteria | E. coli 68±1.46%: Buchnera aphidicola 80% | % | 113575 | Traverse CC, Ochman H.... |
Error rates in RNA sequncing (RNAseq) | Unspecified | cDNA synthesis 3×10^−5–6×10^−5: high-throughput sequencing technologies ≤10^−2–10^−3 | per nucleotide | 113568 | Traverse CC, Ochman H.... |
Error rates in RNA sequncing (RNAseq) using altered library preparation protocols | Unspecified | <10^−8–10^−12 | per nucleotide | 113571 | Traverse CC, Ochman H.... |
Error rate in transcription | Bacteria Escherichia coli | 1E-05 (5e-6 - 5e-5) | mutation/nucleotide | 105212 | Ninio J. Connections... |
Transcription error rate over all conditions (corrected value) | Bacteria Escherichia coli | 8.23E-05 (±0.55×10^-5) | per nucleotide | 113572 | Traverse CC, Ochman H.... |
Transcription error rate (corrected values) | Bacteria Buchnera aphidicola | mRNA 4.67±1.53×10^−5: rRNA 3.28±0.56×10^−5 | per nucleotide | 113573 | Traverse CC, Ochman H.... |
Genome size and GC content in bacteria with small genomes and low GC content | bacteria | Table - link | N/A | 112672 | Lind PA, Andersson DI.... |
Approximate genome size and genome content of various organisms | Various | Table - link | N/A | 103793 | Saier MH Jr. The bacterial... |
Genomic properties of representative bacteria within phyla containing species with both large and highly reduced genomes | bacteria | Table - link | N/A | 108694 | McCutcheon JP, McDonald BR... |