Results
Click a row for more details
| Property | Organism | Value | Units | ID | Details |
|---|---|---|---|---|---|
| Three dimensional diffusion constant of fusion protein with DNA binding domain removed | Bacteria Escherichia coli | 3 | µm^2/sec | 102039 | X. Sunney Xie, Paul J. Choi... |
| Diffusion coefficient of the C-terminal domain of Ada (C-Ada) on elongated DNA | Bacteria Escherichia coli | 1.3х10^6 Table - link | nm^2/sec | 107464 | DeSantis MC, Li JL, Wang... |
| Diffusion coefficient of hOgg1 DNA binding protein on elongated DNA | Human Homo sapiens | 5.78х10^5 Table - link | nm^2/sec | 107461 | DeSantis MC, Li JL, Wang... |
| Diffusion properties of DNA binding proteins on elongated DNA | Generic | Table - link | N/A | 107460 | DeSantis MC, Li JL, Wang... |
| Turnover number of the nucleotide-binding domain of the E. coli hemolysin exporter, HlyB | Bacteria Escherichia coli | 1 | 1/sec | 109034 | Nikaido K, Liu PQ, Ames... |
| Number of proteins with DNA-binding domains | Bacteria Escherichia coli | 267 (Table - link) | Proteins | 109203 | Babu MM, Luscombe NM... |
| Number of proteins with DNA-binding domains | Budding yeast Saccharomyces cerevisiae | 245 (Table - link) | Proteins | 109204 | Babu MM, Luscombe NM... |
| Number of proteins with DNA-binding domains | Nematode Caenorhabditis elegans | 1463 (Table - link) | Proteins | 109205 | Babu MM, Luscombe NM... |
| Number of proteins with DNA-binding domains | Human Homo sapiens | 2604 (Table - link) | Proteins | 109206 | Babu MM, Luscombe NM... |
| Number of proteins with DNA-binding domains | Thale cress Arabidopsis thaliana | 1667 (Table - link) | Proteins | 109207 | Babu MM, Luscombe NM... |
| Residence time of nonspecific binding of protein on DNA | Bacteria Escherichia coli | <=5 | msec | 102037 | X. Sunney Xie, Paul J. Choi... |
| Length of immunoglobulin structural domain (immunoglobulin domain) | vertebrates | 110 | amino acids | 103574 | Kenneth M. Murphy, Paul... |
| In vitro residence time for glucocorticoid receptor (GR) in increased DNA conc. (22µg/ml) | Rat Rattus norvegicus | 20 | Sec | 106486 | Lieberman BA, Nordeen... |
| Average distance between DNA-binding proteins on chromosome | Bacteria Escherichia coli | ∼36 | bp | 110445 | Li GW, Burkhardt D, Gross C... |
| Duration for which tsr domain appears stationary | Bacteria Escherichia coli | 50 - 100 | msec | 112059 | Ullman G, Wallden M,... |
| Estimated number of DNA-binding proteins | Bacteria Escherichia coli | ~240 - 260 | proteins | 113767 | Ishihama A, Functional... |
| Single-stranded DNA binding proteins per cell | Bacteria Escherichia coli | 1000-7000 | Copies/cell | 102027 | X. Sunney Xie, Paul J. Choi... |
| Dissociation constant for nonspecific RNAP-DNA binding | Bacteria Escherichia coli | 3100 | μM | 110064 | Klumpp S, Hwa T. Gro... |
| Numbers of DNA-binding transcription factors in five organisms | Various | Table - link | N/A | 109202 | Babu MM, Luscombe NM... |
| Probability of ribosome binding to mRNA | Bacteria Escherichia coli | 0.8 | unitless | 102043 | X. Sunney Xie, Paul J. Choi... |