Results
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| Property | Organism | Value | Units | ID | Details |
|---|---|---|---|---|---|
| Ribosome drop-off rate (Rate of premature translation termination events) | Bacteria Escherichia coli | 2.4e-4 (±5e-5) | events/codon | 113578 | Sin, C., Chiarugi, D.... |
| Amino acid replacement rate [per site per year] | Generic | 1E-09 | year^-1 | 100358 | Hartl and Clark, "Principles... |
| Number of amino acids protruding from the ribosome when N-terminal acetylation (N-Ac) occurs | Eukaryotes | 25 - 50 | amino acids | 116983 | Van Damme P et al., NatF... |
| Average number of ribosomes loaded per mRNA message | Budding yeast Saccharomyces cerevisiae | 3 | ribosomes/mRNA message | 111690 | Guet CC et al., Minimally... |
| Average translation rate | Bacteria Escherichia coli | ~8 | amino acids/sec | 111689 | Guet CC et al., Minimally... |
| Misincorporation rate of Amino acids in translation for cysteine mutations | Bacteria Escherichia coli | 0.0013 to 0.004 Table - link | Mismatched/matched amino acid | 105215 | Bouadloun F, Donner D... |
| Frequency of translation elongation events | Budding yeast Saccharomyces cerevisiae | 6e+6 (3E6-9E6) | Events/cell/sec | 104314 | von der Haar T. A qu... |
| Selected apparent second order rate constants for reaction of HOCl with amino acid side chains, backbone amides and models of these structures | Generic | Table - link | M^-1×sec^-1 | 114481 | Davies MJ. Protein oxidation... |
| RNA polymerase III elongation rate | Budding yeast Saccharomyces cerevisiae | 21-22 | nt/sec | 103657 | Matsuzaki H, Kassavetis GA... |
| Number of amino acid residues in 70S ribosome | Bacteria Escherichia coli | 7536 (Table - link) | aa/rib | 110218 | Calculated by Prof. Stefan... |
| Volumes of RNA bases and amino acids | Generic | Table - link | N/A | 102522 | Neil R. Voss. 2006 'Geometric... |
| Kd for binding of Elongation Factor-G-GTP to vacant ribosome | Bacteria Escherichia coli | 0.27 | µM | 103826 | Yu H, Chan YL, Wool IG.... |
| Number of amino acid residues in 70S ribosome | bacteria | 7336 (Table - link) | aa/rib | 110217 | Bremer, H., Dennis, P.... |
| Number of elongation factor Tu (EF-Tu) per ribosome (most abundant protein in fast-growing) | Bacteria Escherichia coli | 6 - 7 | molecules/ribosome | 110048 | Klumpp S, Scott M, Pedersen S... |
| Ribosome translocation & elongation rate in U2OS and HEK293 cells (see comments section for difference between measurements) | Human Homo sapiens | translocation rate 3.5 ± 1.1: elongation rate 3.1 ± 0.14: elongation rate of shorter gene 4.9 | codons/s | 112744 | Yan X, Hoek TA, Vale RD... |
| Apparent second order rate constant of chorismate mutase | Bacteria Bacillus subtilis | ~10^6 | M^-1×sec^-1 | 109298 | Mattei P, Kast P, Hilvert... |
| ATP requirement to convert nitrate to amino acids | Plants | ~5 | ATP/amino acid | 107717 | Piques et al., Ribosome... |
| Size of proteins (aa=amino acids) homeodomain proteins are embedded in | Eukaryotes | mouse Hopx 73 aa: C. elegans CEH-7 84 aa: Arabidopsis Ringlet 1 1,705 aa: human ZFHX3 3,703 | aa | 116972 | Bürglin TR, Affolter... |
| Amino acid misincorporation rate with a complete competitor tRNA population | bacteria | 0.002-0.01 | incorrect amino acid/correct amino acid | 103483 | Hani S. Zaher and Rachel... |
| Variation in the peptide chain elongation rate and the number of active ribosomes in the cell per one amino acid in synthesised proteins in various microbes | Various | Table - link | N/A | 107194 | Karpinets TV, Greenwood DJ... |