Mean information content (bits of information) in transcription factor sequence

Value 25.1 bits of information Range: ±5 Table - link bits of information
Organism bacteria
Reference Wunderlich Z, Mirny LA. Different gene regulation strategies revealed by analysis of binding motifs. Trends Genet. 2009 Oct25(10):434-40. supplementary material p.15 table S6PubMed ID19815308
Primary Source Kazakov, A.E., et al. (2007) RegTransBasea database of regulatory sequences and interactions in a wide range of prokaryotic genomes. Nucleic acids research 35, D407-412PubMed ID17142223
Comments P.437 left column top paragraph:"Taken together, [investigators] conclude the biases from the number of sites used to construct a TF [Transcription Factor]-binding motif do not change [their] general findings. Finally, these results are consistent for motifs obtained both in vivo and in vitro and for all available data sets (Table S6 in the supplementary material)." For properties of binding motifs for bacteria, yeast and multicellular eukaryotes see p.436 figure 2 (refs beneath figure) link
Entered by Uri M
ID 111564