| Range |
Table - link
|
| Organism |
Eukaryotes |
| Reference |
Zhang G, Lukoszek R, Mueller-Roeber B, Ignatova Z. Different sequence signatures in the upstream regions of plant and animal tRNA genes shape distinct modes of regulation. Nucleic Acids Res. 2011 Apr39(8):3331-9. doi: 10.1093/nar/gkq1257. p.3336 table 1PubMed ID21138970
|
| Method |
"Taking advantage of the large number of sequenced
and annotated genomes, [researchers] have undertaken a systematic
analysis of the upstream promoter regions of tRNA genes
in several multicellular eukaryotic genomes...Using deep-sequencing data
of the transcriptome of 16 human tissues, [researchers] identified
multiple splicing variants of Bdp1 and Brf1 with a
tissue-specific expression pattern." |
| Comments |
"...this search extracted anticodon-dependent
motifs in the upstream segments of the majority of the
tRNA families (Figure 2 and Supplementary Figure S4)
in all tested animal genomes (Table 1 and Supplementary
Table S1) however, no such dependence was observed for
any of the plant genomes." |
| Entered by |
Uri M |
| ID |
109633 |