Summary of proteomic results for membrane-associated protein fraction

Range Table - link
Organism Bacteria Acinetobacter baumannii
Reference Yun SH et al., Quantitative proteomic analysis of cell wall and plasma membrane fractions from multidrug-resistant Acinetobacter baumannii. J Proteome Res. 2011 Feb 4 10(2):459-69. doi: 10.1021/pr101012s. p.463 table 2PubMed ID21053951
Method p.468 left column 2nd paragraph:"Quantitative analysis of the membrane-associated fraction of A. baumannii DU202 was performed to identify antibiotic resistance-related proteins, using a label method (iTRAQ) and label-free methods (LC-MS/MS and MudPIT). Among the 484 identified proteins in the membrane-associated fraction, 62.4% of proteins (302) were plasma membrane or cell wall proteins. A total of 302 membrane proteins were classified as outer membrane (77), inner membrane (129), and periplasmic proteins (96) this is the largest number of proteins identified by proteomic analysis of A. baumannii [ref 14]. Prediction of transmembrane domains by TMHMM [Server version 2.0 program ( link services/TMHMM-2.0/ )] revealed that proteins with 1-3 TM domains were most effectively enriched (Table 2)."
Comments See abbreviations beneath table
Entered by Uri M
ID 111524