Results
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Property | Organism | Value | Units | ID | Details |
---|---|---|---|---|---|
Dissociation constant for initial binding step of tRNA selection | Bacteria Escherichia coli | 85 | sec^-1 | 103471 | Hani S. Zaher and Rachel... |
Fraction of tRNA nucleotides that are modified | Unspecified | 17 | % | 110981 | Puri P. et al., Systematic... |
Association constant for codon recognition step of tRNA selection | Bacteria Escherichia coli | 190 | sec^-1 | 103472 | Hani S. Zaher and Rachel... |
Number of aminoacyl-tRNA synthetase in E. coli K38 | Bacteria Escherichia coli | 425-1226 | Copies/cell | 105276 | Jakubowski H, Goldman... |
Overall selectivity of tRNA binding to ribosome under competitive conditions | Bacteria Escherichia coli | 450 | Fold | 103481 | Hani S. Zaher and Rachel... |
Identity of thirteen tRNA species and their accumulation rates | Bacteria Escherichia coli | Table - link | N/A | 107983 | Emilsson V, Näslund AK... |
Affinity with which EF-Tu binds to aa-tRNA in its GTP-bound active state | bacteria | ≈1e-8 | M | 110161 | Boltaña S, Reyes-Lopez F... |
tRNADB-CE : tRNA gene database curated manually by experts | Various | Data base - link | N/A | 104389 | Abe T, Inokuchi H, Yamada Y... |
Diffusion coefficient of tRNA before and after aminoacylation | Budding yeast Saccharomyces cerevisiae | 68.4±1 before: 58±2 after aminoacylation | μm^2/sec | 107935 | Potts RO, Ford NC Jr... |
Kd of Complex I (peptidyl-tRNA in the A-site) and EF-G-GTP | Bacteria Escherichia coli | 0.27 | µM | 103824 | Yu H, Chan YL, Wool IG.... |
Kd of Complex II (peptidyl-tRNA in the P-site) for EF-G-GTP | Bacteria Escherichia coli | 3.04 | μM | 103825 | Yu H, Chan YL, Wool IG.... |
Overall amino-acyl tRNA misincorporation rate measured with single molecule technique | Bacteria Escherichia coli | 0.0071 | incorrect/correct aa-tRNA | 103484 | Hani S. Zaher and Rachel... |
Shell volume of phenylalanine tRNA | Budding yeast Saccharomyces cerevisiae | 36049 (Table - link) | Å^3 | 103044 | Neil R. Voss. 2006 'Geometric... |
Number of aminoacyl-tRNA molecules in cells of various strains | Bacteria Escherichia coli | 52000-64000 | Copies/cell | 105274 | Jakubowski H, Goldman... |
Fraction of charged tRNA under non-limiting amino acid supply | Bacteria Escherichia coli | ~80 | % | 109641 | Zhang G, Ignatova Z.... |
Quantities of aminoacyl-tRNA and their turnover in E. coli K38 | Bacteria Escherichia coli | Table - link | N/A | 105275 | Jakubowski H, Goldman... |
Fraction of misincorporation of aa-tRNA occuring during initial selection stage | Bacteria Escherichia coli | 20 | % | 103485 | Hani S. Zaher and Rachel... |
Quantities of individual aa-tRNA molecules in cells of various strains | Bacteria Escherichia coli | Table - link | N/A | 105273 | Jakubowski H, Goldman... |
Percent of rRNA and tRNA from total RNA | bacteria | 95–97 | % | 102939 | Rosenow, C., et al.,... |
Halftime of hydrolysis event of tRNA (70 phosphodiester bonds) at 25°C | Generic | 20 | days | 105357 | Wolfenden R, Snider MJ.... |