Results
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| Property | Organism | Value | Units | ID | Details |
|---|---|---|---|---|---|
| Translation of lacZ mRNA in strains HB123 carrying a wild-type lac operon and SL106 carrying a spc-lac operon fusion | Bacteria Escherichia coli | Table - link | N/A | 110059 | Liang ST, Ehrenberg M... |
| Transcript levels in unfractionated extracts and polysome gradient fractions, and estimation of rates of translation | Thale cress Arabidopsis thaliana | Excel Table - link | N/A | 107732 | Piques et al., Ribosome... |
| YFP Maturation Time | Budding yeast Saccharomyces cerevisiae | 39 (±7) | Minutes | 108677 | Gordon, Andrew Colman-Lerner... |
| CFP Maturation Time | Budding yeast Saccharomyces cerevisiae | 49 (±9) | Minutes | 108678 | Gordon, Andrew Colman-Lerner... |
| Increase in premature peptide release at A site of ribosome when there are single nucleotide codon mismatches at both P site and E site | bacteria | 4 | Orders of magnitude | 103487 | Hani S. Zaher and Rachel... |
| Amino acid misincorporation rate with a complete competitor tRNA population | bacteria | 0.002-0.01 | incorrect amino acid/correct amino acid | 103483 | Hani S. Zaher and Rachel... |
| Increase in premature peptide release at A site of ribosome when there is a single mismatch of codon/anti codon double helix at P site | bacteria | 2 | Orders of magnitude | 103486 | Hani S. Zaher and Rachel... |
| Length of siRNA | Human Homo sapiens | 21-23 | nucleotides | 102484 | Elbashir SM, Harborth J... |
| Length of siRNA | Fruit fly Drosophila melanogaster | 21-22 | nucleotides | 102483 | Elbashir SM, Lendeckel W... |
| Lifetime estimates of mRNA in live bacteria exceed typical times required for transcription of a message by a factor of | Bacteria Escherichia coli | ~15 | Unitless | 108599 | Bakshi S, Siryaporn A... |
| Average number of ribosomes loaded per mRNA message | Budding yeast Saccharomyces cerevisiae | 3 | ribosomes/mRNA message | 111690 | Guet CC et al., Minimally... |
| Level of accuracy of nucleotide incorporation in DNA replication | Unspecified | 1e-8-1e-10 | mismatched/correct nucleotide | 103452 | Hani S. Zaher and Rachel... |
| Nucleotide misincorporation rate in transcription | Bacteria Escherichia coli | 1e-4 | mismatch/nucleotide | 103453 | Hani S. Zaher and Rachel... |
| Ribosomal GTP hydrolysis, dipeptide formation and translocation times | Bacteria Escherichia coli | Table - link | N/A | 105068 | Bilgin N, Claesens F... |
| Number of times mRNA transcript can be translated | Bacteria Escherichia coli | ≤40 | translations/transcript | 113567 | Traverse CC, Ochman H.... |
| Rate of protein synthesis from mRNA transcript (median) | Mammalian tissue culture cell | original 2011 value ~140: updated 2013 value 1,000 | Proteins/mRNA/hour | 106382 | Schwanhäusser B, Busse D... |
| Average inter-ribosome distance on mRNA in U2OS and HEK293 cells | Human Homo sapiens | ~200 - 400 | nts | 112743 | Yan X, Hoek TA, Vale RD... |
| Half life of proteins | Budding yeast Saccharomyces cerevisiae | Table - link | N/A | 104152 | Belle A, Tanay A, Bitincka L... |
| Maturation rates of green fluorescent proteins and yellow fluorescent proteins | Generic | Table - link | N/A | 106888 | Iizuka R, Yamagishi-Shirasaki... |
| Median number of proteins produced from one transcript | Bacteria Escherichia coli | 28 (Table - link) | proteins/transcript | 109526 | Siwiak M, Zielenkiewicz... |