Results

Click a row for more details

Property Organism Value Units ID Details
Hunchback mRNA transcript halflife Fruit fly Drosophila melanogaster ~60 min 111723 Garcia HG, Tikhonov M...
Average predicted mRNA transcript size Fruit fly Drosophila melanogaster 3058 Base pairs 104336 Adams MD et al, The genome...
Average number of proteins per transcript Bacteria Escherichia coli 10 unitless 100196 A Arkin, J Ross, HH McAdams...
Dwell time of a transcript at the transcription site in nucleus Budding yeast Saccharomyces cerevisiae 290 (±30) Sec 106351 Larson DR, Zenklusen D...
Median number of proteins produced from one transcript Bacteria Escherichia coli 28 (Table - link) proteins/transcript 109526 Siwiak M, Zielenkiewicz...
Ratio between number of beta-galactosidase proteins produced per E. Coli RNAP transcript and T7 phage RNAP transcript Bacteria Escherichia coli 100 Unitless 102081 Benno Muller-hill, 1996...
Number of times mRNA transcript can be translated Bacteria Escherichia coli ≤40 translations/transcript 113567 Traverse CC, Ochman H....
Maternal mRNA halflives and transcript synthesis rate in embryo Sea urchin Strongylocentrotus purpuratus Table - link N/A 105629 Howard-Ashby M, Materna SC...
Rate of protein synthesis from mRNA transcript (median) Mammalian tissue culture cell original 2011 value ~140: updated 2013 value 1,000 Proteins/mRNA/hour 106382 Schwanhäusser B, Busse D...
Average length of RNA transcript for various RNA Polymerases Eukaryotes ~13.5 pol I: ~15 Pol II: ~0.1 Pol III kb 107496 Editor: Dr. Robert A. Meyers...
Transcript lifetime & protein halflife of the gluconeogenic gene G6pc in liver Mouse Mus musculus transcript lifetime ~20 - 30min: protein halflife 10 - 45min min 112173 Bahar Halpern K. et al....
Average percent of a given transcript species that is occupied by ribosomes Unspecified ~70 % 107718 Piques et al., Ribosome...
Transcription error rate throughout ~450-bp cDNA of CAN1 transcript Yeast 1.3e-3 substitution/bp 111145 Imashimizu M, Oshima T...
Number of proteins per mRNA transcript in genes that were identified at both the mRNA and protein level Mammalian tissue culture cell 2800 Proteins/transcript 106376 Schwanhäusser B, Busse D...
Estimated RNA half-lives for different transcript classes in K562 cells Human Homo sapiens Figure - link min 112682 Schwalb B et al., TT-seq...
Transcript levels in unfractionated extracts and polysome gradient fractions, and estimation of rates of translation Thale cress Arabidopsis thaliana Excel Table - link N/A 107732 Piques et al., Ribosome...
Total number of transcripts and proteins and transcript and protein degradation rates Microbes Table - link N/A 112162 Michael Lynch and Georgi...
Frequency of initiation of one transcript from each fully induced or constitutive lac promoter Bacteria Escherichia coli 1.7 1/sec 102077 Benno Muller-hill, 1996...
mRNA transcript half life in hepatocellular carcinoma cell line HepG2 and the primary fibroblast cell line Bud8 Human Homo sapiens 10 Hours 106867 Yang E, van Nimwegen E...
Mean dwell time of transcripts at transcription site during G1 Budding yeast Saccharomyces cerevisiae 770±260 PP7- MDN1 transncript: 140±30 MDN1-PP7 transcript Sec 106353 Larson DR, Zenklusen D...