Results
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Property | Organism | Value | Units | ID | Details |
---|---|---|---|---|---|
Fraction of misfolded proteome degraded by Lon ATP-dependent AAA+ protease | Bacteria Escherichia coli | ~50 | % | 111875 | Gur E, Sauer RT. Degrons... |
Amino acid usage versus aerobic expression data across the entire proteome | Budding yeast Saccharomyces cerevisiae | Table - link | N/A | 107584 | Raiford DW, Heizer EM Jr... |
Amino acid usage versus anaerobic expression data across the entire proteome | Budding yeast Saccharomyces cerevisiae | Table - link | N/A | 107585 | Raiford DW, Heizer EM Jr... |
Fraction of proteome of Gram-negative E. coli K12 that is extracytoplasmic and folds in the cell envelope or beyond | Bacteria Escherichia coli | ~35 | % | 114120 | De Geyter J et al., Protein... |
Fraction of the endogenous proteome that requires additional assistance in folding from the multisubunit chaperonin GroEL | Bacteria Escherichia coli | 10 | % | 106325 | Scotto-Lavino E, Bai M... |
Comparison of the experimental cytosolic sample with the complete predicted E. coli proteome | Bacteria Escherichia coli | Table - link | N/A | 109430 | Ishihama et al., Protein... |
Percent of HeLa cell transcriptome mass that the most abundant 2000 transcripts constitute | Human Homo sapiens | 75 | % | 108430 | Nagaraj N, Wisniewski JR... |
Lower bound of genes expressed in HeLa cells | Human Homo sapiens | 10,000 to 12,000 | genes | 108426 | Nagaraj N, Wisniewski JR... |
Fraction of all proteins localized to multiple subcellular compartments | Human Homo sapiens | 45 | % | 107296 | Fagerberg et al., Mapping... |
Number of proteins produced per cell | HeLa cell line | 6e+9 | Proteins/cell | 109528 | Siwiak M, Zielenkiewicz... |
Size of average protein | Budding yeast Saccharomyces cerevisiae | 467 (±29 Table - link) | Amino acids | 105224 | Harrison PM, Milburn D... |
Abundance of proteins in HeLa cells | Human Homo sapiens | Excel Table - link | N/A | 108424 | Nagaraj N, Wisniewski JR... |
Contribution of integral membrane proteins to total protein mass in HeLa cell | Human Homo sapiens | 7.6 | % | 108432 | Nagaraj N, Wisniewski JR... |
Number of protein coding genes | Nematode Caenorhabditis elegans | 19735 | unitless | 101364 | Hillier LW, Coulson A... |
Number of protein-coding genes | Mouse Mus musculus | 20210 | Unitless | 100310 | Church et al, Lineag... |
Protein abundance (download Excel supplemental tables from link below) | Budding yeast Saccharomyces cerevisiae | link | N/A | 114182 | Brandon Ho et al., C... |
Number of genes | Prochlorococcus | ~1,900 | genes | 111980 | Hopkinson BM, Young JN... |
Fraction of the most abundant proteins in the cytoplasm that are anionic (a negatively charged ion) at physiological pH | Bacteria Escherichia coli | ~90 | % | 114103 | Kyne C et al., Protein... |
Contribution of ribosomes to total protein mass in HeLa cell | Human Homo sapiens | 6 | % | 108431 | Nagaraj N, Wisniewski JR... |
Range of protein pI values | Bacteria Escherichia coli | 3.38 to 13.0 | Unitless | 109428 | Lopez-Campistrous et al.... |