Dissociation constants and synthesis rates of formation all possible deoxynucleotide combinations by polymerase beta
|
Bacteria Escherichia coli |
Table - link |
N/A |
104115 |
Ahn J, Kraynov VS, Zhong X... |
Percentage of RNA-polymerase-II-mediated transcription initiation events that involve ribosomal protein (RP) genes
|
Budding yeast Saccharomyces cerevisiae |
50 |
% |
107349 |
JR Warner,The economics... |
DNA polymerase error rates and the contributions of each fidelity process to mutation rate
|
Eukaryotes |
Figure link - link |
N/A |
105467 |
Kunkel TA. Evolving views... |
RNA polymerase transcription rate in different media and doubling times at 37°C
|
Bacteria Escherichia coli |
28-89 Table - link |
nucleotides/sec |
104902 |
Vogel U, Jensen KF. ... |
Elongation rate of RNA polymerase in Xenopus stage VI oocytes
|
African clawed frog Xenopus laevis |
15 |
nucleotides/s |
100332 |
Gurdon and Wakefield... |
Elongation rate of RNA polymerase II for both A20 and Icam1 in fibroblasts
|
Mouse Mus musculus |
~8 |
kb/min |
112441 |
Hao S, Baltimore D. RNA... |
Percent of the transcripts produced by RNA polymerase II that encode ribosomal proteins and ribosome assembly factors
|
Budding yeast Saccharomyces cerevisiae |
≥60 |
% |
110021 |
Woolford JL Jr, Baserga... |
Replication rate of core polymerase in complex with E. coli beta clamp expressed in S. aureus
|
Bacteria Staphylococcus aureus |
240 |
nucleotides/sec |
104392 |
Klemperer N, Zhang D... |
Possible increase in ribosome and RNA polymerase molecule counts in exponential phase compared with other cell cycle phases
|
bacteria |
1 |
order of magnitude |
112364 |
Soler-Bistué A et al.... |
Parameters pertaining to the synthesis rates of ribosomes and RNA polymerase
|
Bacteria Escherichia coli |
Table - link |
N/A |
110159 |
Ehrenberg M, Bremer H... |
Cost of assembly of the sliding clamp associated with the polymerase in DNA replication
|
Microbes |
2 - 4 |
~P (ATP)/event |
112152 |
Michael Lynch and Georgi... |
Diffusion coefficient of processivity factor of herpes simplex virus DNA polymerase, UL42, on elongated DNA
|
Virus Herpes simplex |
5.1х10^3 to 2.2х10^4 Table - link |
nm^2/sec |
107463 |
DeSantis MC, Li JL, Wang... |
Distance from transcription start site (TSS) where RNA polymerase II (Pol II) partly pauses
|
Unspecified |
20 - 60 |
nts |
111024 |
Fuchs G, Voichek Y, Benjamin... |
Distribution of functional states of RNA polymerase in E. coli B/r growing exponentially at growth rates of μ=1.0 or 2.5 doublings/h
|
Bacteria Escherichia coli |
Table - link |
N/A |
106319 |
Bremer H, Dennis P, Ehrenberg... |
DNA polymerase error rate accounted for by the free-energy difference between correct and incorrect base pairs in solution
|
Generic |
0.01 |
unitless |
105468 |
Kunkel TA. Evolving views... |
Ratio between number of beta-galactosidase proteins produced per E. Coli RNAP transcript and T7 phage RNAP transcript
|
Bacteria Escherichia coli |
100 |
Unitless |
102081 |
Benno Muller-hill, 1996... |
Concentration of dTTP in a 42fL yeast cell, cells measured asychronously
|
Budding yeast Saccharomyces cerevisiae |
70 |
µM |
101413 |
Koç A, Wheeler LJ, Mathews CK... |
Concentration of dATP in a 42fL yeast cell, measured from an asyncrhonous population
|
Budding yeast Saccharomyces cerevisiae |
44 |
µM |
101414 |
Koç A, Wheeler LJ, Mathews CK... |
Concentration of dCTP in a 42fL yeast cell, measured from an asyncrhonous population
|
Budding yeast Saccharomyces cerevisiae |
18 |
µM |
101415 |
Koç A, Wheeler LJ, Mathews CK... |
Concentration of dGTP in a 42fL yeast cell, measured from an asyncrhonous population
|
Budding yeast Saccharomyces cerevisiae |
15 |
µM |
101416 |
Koç A, Wheeler LJ, Mathews CK... |