Results
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| Property | Organism | Value | Units | ID | Details |
|---|---|---|---|---|---|
| Decay rates of transcription-related mRNAs and non-transcription related mRNAs in hepatocellular carcinoma cell line HepG2 | Human Homo sapiens | 0.221 h^-1 transcription-related transcripts: 0.127h^-1 nontranscriptional transcripts | Hours^-1 | 106870 | Yang E, van Nimwegen E... |
| Number of spurious transcription factor binding sites per genome | Budding yeast Saccharomyces cerevisiae | 10^2 to 10^4 | Spurious sites per transcription factor | 106213 | Wunderlich Z, Mirny LA.... |
| Average cellular transcription rates predicted by model | Mammalian tissue culture cell | 2 | mRNA/hour | 106379 | Schwanhäusser B, Busse D... |
| Transcription elongation rate in CH184 strain with streptomycin (Sm) | Bacteria Escherichia coli | 30 (Table - link) | nts/sec | 108492 | Proshkin S, Rahmouni AR... |
| The number of Eve transcription factor molecules per nucleus | Fruit fly Drosophila melanogaster | 50000 (Table - link) | Molecules/nucleus | 106844 | Mark D. Biggin, Animal... |
| Number of C/EBPβ transcription factor molecules per cell | Mouse Mus musculus | 250,000 murine macrophage: 2,500,000 LPS stimulated macrophage | Molecules/cell | 106896 | Mark D. Biggin, Animal... |
| Number of Ikaros transcription factor molecules per murine thymocyte | Mouse Mus musculus | 250000 (Table - link) | Molecules/cell | 106900 | Mark D. Biggin, Animal... |
| Diffusion coefficient of transcription factors in the nucleus | Eukaryotes | 0.5-5 | μm^2/sec | 105295 | Hager GL, McNally JG... |
| Number of GR transcription factor molecules per HeLa carcinoma cell | Human Homo sapiens | 100000 (Table - link) | Molecules/cell | 106906 | Mark D. Biggin, Animal... |
| Number of myc transcription factor molecules per HeLa carcinoma cell | Human Homo sapiens | 60,000 MCF-7 breast carcinoma cell line: 140,000 HCT-116 colon carcinoma cell line | Molecules/cell | 106907 | Mark D. Biggin, Animal... |
| Number of spurious transcription factor binding sites per genome | Eukaryotes | 10^4 to 10^6 | Spurious sites per transcription factor | 106212 | Wunderlich Z, Mirny LA.... |
| Length of GAGA transcription factor recognition target | Fruit fly Drosophila melanogaster | 7 (Table - link) | bp | 100117 | Nalefski EA, Nebelitsky E... |
| Number of MyoD transcription factor molecules per RD rhabdomyosarcoma cell | Human Homo sapiens | 50000 (Table - link) | Molecules/cell | 106908 | Mark D. Biggin, Animal... |
| Predicted number of transcription factors in E. coli k12 | Bacteria Escherichia coli | 268 (Table - link) | Unitless | 105088 | Madan Babu M, Teichmann SA... |
| Time a transcription factor searches for its target sequence | Bacteria Escherichia coli | 250 | sec | 109955 | Li GW, Xie XS. Central... |
| Whole dataset of the nascent transcription rate (production rate per gene) | Budding yeast Saccharomyces cerevisiae | Excel Table - link | N/A | 106765 | Pelechano V, Chávez S... |
| Number of alternative transcription factor binding sites in the genome | Eukaryotes | 1e+9 | Unitless | 106183 | Wunderlich Z, Mirny LA.... |
| RNA polymerase II transcription elongation rate in HeLa cells | Human Homo sapiens | 50 -100 | nucleotides/sec | 111721 | Sehgal PB, Derman E,... |
| Number of TR transcription factor molecules per rat liver tissue | Rat Rattus norvegicus | 4000 (Table - link) | Molecules/cell | 106902 | Mark D. Biggin, Animal... |
| Number of transcription factors and genome size of 176 prokaryotes | prokaryote | Table - link | N/A | 105075 | Madan Babu M, Teichmann SA... |