Percent of strains that express at least one prophage functional gene

Range 67-98 %
Organism Bacteria Escherichia coli
Reference Schicklmaier P, Moser E, Wieland T, Rabsch W, Schmieger H. A comparative study on the frequency of prophages among natural isolates of Salmonella and Escherichia coli with emphasis on generalized transducers. Antonie Van Leeuwenhoek. 1998 Jan73(1):49-54. p. 53 table 4PubMed ID9602278
Method All strains studied for phage release were cultivated starting with single colonies to be sure that the phages were not contaminants. Nevertheless, there might be presumed that researchers were dealing with phages carried along on the outside of the cell or in a pseudolysogenic state. (Both possibilities would not diminish the importance of the abundance of transducing phage as vehicles for gene transfer in bacterial populations in nature). In order to demonstrate that the released (P22 related) phages can really be traced back to integrated prophages, they hybridized EcoRI digested phage DNA and equally treated chromosomal DNA of their host strains against total DNA of phage P22 as a probe.
Comments Researchers studied two collections of the species Escherichia coli: the ECOR collection (Ochman & Selander 1984), a reference collection analogous to SARA and SARB, and an additional collection (Gießen E. coli collection) comprising isolates from cattle, collected in 1993 and 1994 at the Veterinary Institute of the University of Gießen, Germany 67.2% for ECOR and 97.5% for Gießen, 84/107 strains in total. These values after induction with mitomycin C. Before induction levels were 49% and 77.5%, respectively.
Entered by Uri M
ID 105605