Results
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Property | Organism | Value | Units | ID | Details |
---|---|---|---|---|---|
Ratio between GFP diffusion rate in cytoplasm of DH5α strain and in water | Bacteria Escherichia coli | 0.09 | Unitless | 105896 | Elowitz MB, Surette MG... |
GFP diffusion rate in cytoplasm of DH5α strain | Bacteria Escherichia coli | 7.7 (±2.5) | µm^2/s | 100193 | Elowitz MB, Surette MG... |
GFP diffusion rate in cytoplasm of k-12 strain grown in rich medium | Bacteria Escherichia coli | 5.3 (±1.9 table link) | µm^2/s | 105900 | Konopka MC, Shkel IA... |
Diffusion coefficient of Venus YFP in cytoplasm | Bacteria Escherichia coli | 8 (+4/-2) | µm^2/s | 105477 | Elf J, Li G, Xie XS.... |
GFP diffusion rate in cytoplasm of BL21(DE3) strain | Bacteria Escherichia coli | 6.1 (±2.4 Table - link) | µm^2/s | 105898 | Konopka MC, Shkel IA... |
Smoothed histograms (logarithmically spaced bins) of the time distributions for protein folding, translation, and diffusion compared to a range of reaction rates | Bacteria Escherichia coli | Figure link - link | Seconds | 107053 | Dill KA, Ghosh K, Schmit... |
Ratio between GFP diffusion rate in cytoplasm of BL21(DE3) strain and in water | Bacteria Escherichia coli | 0.07 | Unitless | 105897 | Konopka MC, Shkel IA... |
Ratio between GFP diffusion rate in cytoplasm of k-12 strain grown in rich medium and in water | Bacteria Escherichia coli | 0.06 | Unitless | 105899 | Konopka MC, Shkel IA... |
Macromolecular concentration in cytoplasm | Bacteria Escherichia coli | ~300 | mg/mL | 107695 | Adrian H. Elcock and... |
Estimated diffusion coefficients of plasma membrane proteins | Bacteria Escherichia coli | 0.02 to 0.2 Table - link | μm^2/sec | 107986 | Kumar M, Mommer MS, Sourjik... |
Estimated diffusion coefficients of plasma membrane proteins of high molecular mass | Bacteria Escherichia coli | ~0.8 Table - link | μm^2/sec | 107988 | Kumar M, Mommer MS, Sourjik... |
Diffusion coefficients of very large, 3200 kDa, membrane-embedded flagellar basal bodies | Bacteria Escherichia coli | ~0.005 | μm^2/sec | 107987 | Kumar M, Mommer MS, Sourjik... |
Diffusion coefficient of CheY-GFP | Bacteria Escherichia coli | 4.6 (±0.8 Table - link) | μm^2/sec | 107989 | Kumar M, Mommer MS, Sourjik... |
Decrease in diffusion coefficient in cytoplasm compared to dilute solution | Bacteria Escherichia coli | 10 to 30 | Fold | 106193 | Pielak GJ, Li C, Miklos AC... |
Percent of GFP signal emanating from the gfp-ns (nonsense) strain compared to gfp-wt (as result of error in transcription) | Bacteria Bacillus subtilis | 0.4 (±0.1) | % | 105466 | Meyerovich M, Mamou G... |
GFP diffusion rate in rat liver mitochondria | Rat Rattus norvegicus | 26 (20-30) | µm^2/sec | 100300 | Partikian, A., B. Olveczky... |
Effect of microinjected anti-β-COP antibodies on the mobility of ts-O45-G (temperature-sensitive vesicular stomatitis viral membrane glycoprotein) | Vesicular stomatitis Indiana virus | Table - link | N/A | 112940 | Storrie B, Pepperkok R... |
Lateral diffusion of GFP-tagged membrane proteins in the plasma membrane | Bacteria Lactococcus lactis | Table - link | µm^2/sec | 112271 | Mika JT, Schavemaker PE... |
Translational diffusion of GFP in cell | Bacteria Escherichia coli | 3-8 | µm^2/sec | 115862 | Theillet FX et al., ... |
Intracellular diffusion coefficient of GFP At 1.02 Osm, corresponding to 400 mM of external NaCl | Bacteria Escherichia coli | 0.014 | µm^2/sec | 116045 | Mika JT, Poolman B. ... |