Lactose permease H+-lactose symporter: mechanical switch or Brownian ratchet?

Biophys J. 2007 May 15;92(10):3474-91. doi: 10.1529/biophysj.106.100669. Epub 2007 Feb 26.

Abstract

Lactose permease structure is deemed consistent with a mechanical switch device for H(+)-coupled symport. Because the crystallography-assigned docking position of thiodigalactoside (TDG) does not make close contact with several amino acids essential for symport; the switch model requires allosteric interactions between the proton and sugar binding sites. The docking program, Autodock 3 reveals other lactose-docking sites. An alternative cotransport mechanism is proposed where His-322 imidazolium, positioned in the central pore equidistant (5-7 A) between six charged amino acids, Arg-302 and Lys-319 opposing Glu-269, Glu-325, Asp-237, and Asp-240, transfers a proton transiently to an H-bonded lactose hydroxyl group. Protonated lactose and its dissociation product H(3)O+ are repelled by reprotonated His-322 and drift in the electrostatic field toward the cytosol. This Brownian ratchet model, unlike the conventional carrier model, accounts for diminished symport by H322N mutant; how H322 mutants become uniporters; why exchanging Lys-319 with Asp-240 paradoxically inactivates symport; how some multiple mutants become revertant transporters; the raised export rate and affinity toward lactose of uncoupled mutants; the altered specificity toward lactose, melibiose, and galactose of some mutants, and the proton dissociation rate of H322 being 100-fold faster than the symport turnover rate.

MeSH terms

  • Binding Sites
  • Biomechanical Phenomena
  • Computer Simulation
  • Diffusion
  • Enzyme Activation
  • Escherichia coli Proteins / chemistry*
  • Escherichia coli Proteins / ultrastructure*
  • Lactose / chemistry*
  • Models, Chemical*
  • Models, Molecular*
  • Molecular Motor Proteins / chemistry*
  • Molecular Motor Proteins / ultrastructure*
  • Monosaccharide Transport Proteins / chemistry*
  • Monosaccharide Transport Proteins / ultrastructure*
  • Protein Binding
  • Protein Conformation
  • Protons
  • Substrate Specificity
  • Symporters / chemistry*
  • Symporters / ultrastructure*
  • Water / chemistry

Substances

  • Escherichia coli Proteins
  • LacY protein, E coli
  • Molecular Motor Proteins
  • Monosaccharide Transport Proteins
  • Protons
  • Symporters
  • Water
  • Lactose