Results

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Property Organism Value Units ID Details
RNA Pol II transcription speed Various yeast 18-42 unspecified 100 bases/sec 111604 Landenmark HK, Forgan DH...
RNA polymerase II transcription rate Various 18-72 nucleotides/second 101973 Intron Delays and Tr...
Growth rate independent transcription parameters Bacteria Escherichia coli Table - link N/A 110069 Klumpp S, Hwa T. Gro...
Transcription rate of dystrophin mRNA Human Homo sapiens ~2.4 (1.7 - 2.5) kbp/min 111156 Jackson DA, Pombo A,...
Number of transcription factor genes Nematode Caenorhabditis briggsae 995 Unitless 105073 Haerty W, Artieri C, Khezri N...
Diffusion rate of transcription factor Unspecified 1D diffusion rate (along DNA) ~0.05: 3D diffusion rate (cytoplasmic) ~3 μm^2/sec 109954 Li GW, Xie XS. Central...
Transcription elongation rate with chloramphenicol Bacteria Escherichia coli 27 (Table - link) nts/sec 108489 Proshkin S, Rahmouni AR...
Number of transcription factor genes Nematode Caenorhabditis remanei 1093 Unitless 105074 Haerty W, Artieri C, Khezri N...
Transcription initiation rate during G1 Budding yeast Saccharomyces cerevisiae 0.16±0.07 PP7- MDN1 transncript: 0.24±0.1 MDN1-PP7 transcript Min^-1 106354 Larson DR, Zenklusen D...
Transcription rate in kidney cell Rat Rattus norvegicus 1.1 - 1.4 kbp/min 111157 Jackson DA, Pombo A,...
Nucleotide misincorporation rate in transcription Bacteria Escherichia coli 1e-4 mismatch/nucleotide 103453 Hani S. Zaher and Rachel...
Typical speed of ribosomal RNA transcription Bacteria Escherichia coli ~70 nts/sec 112327 Chen H, Shiroguchi K...
Fraction of transcription in HeLa cell Human Homo sapiens nucleolar RNA ~20%: nucleoplasmic RNA 80% % 111163 Jackson DA, Pombo A,...
Transcription factor content in the genome bacteria 4.39 (Table - link) % 109280 Charoensawan V, Wilson D...
Average RNA polymerase II transcription elongation rate Mammalian tissue culture cell 6.3 nucleotides/sec 100661 Darzacq X, Shav-Tal Y...
Concentration of some transcription factors in animals Unspecified 4000 molecules/cell 110231 Li et al. (2014), System...
Transcription elongation rate at 37˚C Bacteria Escherichia coli 42 (Table - link) nts/sec 108488 Proshkin S, Rahmouni AR...
Length of GAGA transcription factor recognition target Fruit fly Drosophila melanogaster 7 (Table - link) bp 100117 Nalefski EA, Nebelitsky E...
Affinity of transcription factors for nonspecific DNA Generic 10^(-3)-10^(-6) M 100610 G Kolesov, Z Wunderlich...
Transcription elongation rate on the E74 gene Fruit fly Drosophila melanogaster ~1.1 kb/min 111292 Thummel CS, Burtis KC...