Results
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Property | Organism | Value | Units | ID | Details |
---|---|---|---|---|---|
Ribosomal GTP hydrolysis, dipeptide formation and translocation times | Bacteria Escherichia coli | Table - link | N/A | 105068 | Bilgin N, Claesens F... |
Rate of translation by ribosome at 37°C as a function of growth rate | Bacteria Escherichia coli | 12-21 Table - link | amino acids per second | 100059 | Bremer, H., Dennis, P.... |
Stoichiometric content of transcription-translation proteins in E. coli | Bacteria Escherichia coli | Table - link | N/A | 104061 | Bremer, H., Dennis, P.... |
Ribosome drop-off rate (Rate of premature translation termination events) | Bacteria Escherichia coli | 2.4e-4 (±5e-5) | events/codon | 113578 | Sin, C., Chiarugi, D.... |
Genetic parameters for E. coli growing at 2 doub/h, 37°C | Bacteria Escherichia coli | Table - link | N/A | 109083 | Tadmor AD, Tlusty T.... |
Smoothed histograms (logarithmically spaced bins) of the time distributions for protein folding, translation, and diffusion compared to a range of reaction rates | Bacteria Escherichia coli | Figure link - link | Seconds | 107053 | Dill KA, Ghosh K, Schmit... |
Number of ribosomes at onset of starvation | Bacteria Sphingomonas sp. strain RB2256 | 200 | ribosomes/cell | 102215 | Fegatella F., Lim J.... |
Parameters of the growth-rate dependence of the translation speed | Bacteria Escherichia coli | Table - link | N/A | 110049 | Klumpp S, Scott M, Pedersen S... |
Average translation rate in 37°C | Bacteria Escherichia coli | 8.4 | aa/sec | 109524 | Siwiak M, Zielenkiewicz... |
Rate of elongation reaction: Ribosome + RNAn > Ribosome·RNAn+1 | Bacteria Escherichia coli | 100 | bp/sec | 100197 | A Arkin, J Ross, HH McAdams... |
Total number of amino acids in a cell (mostly in proteins) | Bacteria Escherichia coli | 5.6×10^8 - 2.5×10^9 Table - link | Amino acids | 100089 | Bremer, H., Dennis, P.... |
Number of ribosomes/cell in exponentially growing E. coli B/r at 37° C | Bacteria Escherichia coli | 6800-72000 Table - link | Copies/cell | 101441 | Bremer, H., Dennis, P.... |
Number of ribosomes and ribosomal concentration at different growth rates | bacteria | Table - link | N/A | 102217 | Fegatella F., Lim J.... |
Typical values of rate of ribosome progression in animal cells at 25°-26°C | Metazoa animals | 4 to 5 | amino acids/sec/translating ribosome | 107784 | Piques et al., Ribosome... |
RNA polymerase transcription rate of mRNA (at 37°C) | Bacteria Escherichia coli | 39 - 55 Table - link | nucleotides/sec | 104900 | Bremer, H., Dennis, P.... |
Fraction of ribosomes that are involved in translation under normal conditions | Microbes | >90 | % | 112797 | Bartholomäus A et al.... |
Translation time of of α-globin in vitro | Rabbit | 1.49 | Seconds/amino acid | 101979 | Lodish HF and Jacobsen M... |
Translation time of β-globin in vitro | Rabbit | 1.48 | Seconds/amino acid | 101980 | Lodish HF and Jacobsen M... |
Rate at which ribosomes progress from 5' ends of transcripts | Mouse Mus musculus | 5.6 | Amino acids/second | 107952 | Ingolia NT, Lareau LF... |
Arrhenius constant (µ) for growth of E. coli B/r (21-37°C) | Bacteria Escherichia coli | 54-59 | kJ/mole | 105004 | John L. Ingraham and... |