Subsystem distribution of reactions unique to the G. metallireducens iAF987 reconstruction

Range Table - link Number of reactions
Organism Bacteria Geobacter metallireducens
Reference Feist AM. et al., Constraint-based modeling of carbon fixation and the energetics of electron transfer in Geobacter metallireducens. PLoS Comput Biol. 2014 Apr 24 10(4):e1003575. doi: 10.1371/journal.pcbi.1003575. p.3 table 1PubMed ID24762737
Method "An updated reconstruction of G. metallireducens GS-15, iAF987, was generated by reconciling an existing genome-scale reconstruction [13] and an updated genome annotation, performing a bottomup reconstruction of additional metabolic pathways."
Comments "The iAF987 reconstruction contains 227 genes not in either reconstruction, thus representing a significant advancement of coverage. These newly included genes encode several unique pathways, encoding 325 unique reactions, which have not previously appeared in a collection of 14 representative reconstructions (Table 1) from the UCSD database from which iAF987 was constructed and is internally consistent (see Text S1 for a detailed comparison of iAF987 to previous work)."
Entered by Uri M
ID 111306